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Gene: Defa6 (defensin alpha 6) Rattus norvegicus
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Symbol: Defa6
Name: defensin alpha 6
Description: Predicted to be involved in several processes, including innate immune response in mucosa; membrane disruption in other organism; and response to bacterium. Predicted to localize to extracellular space. Orthologous to human DEFA3 (defensin alpha 3); DEFA4 (defensin alpha 4); and DEFA6 (defensin alpha 6); INTERACTS WITH acrylamide; bis(2-ethylhexyl) phthalate; cadmium dichloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: alpha-defensin 6
Orthologs:
Mus musculus (house mouse) : Defa6 (defensin, alpha, 6)  MGI  Alliance
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01675,400,781 - 75,401,655 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1675,400,781 - 75,401,655 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01675,017,486 - 75,018,360 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41675,087,445 - 75,088,319 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1668,277,794 - 68,278,668 (+)NCBICelera
Cytogenetic Map16q12.5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Defa6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1562293
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.