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Gene: Ubr1 (ubiquitin protein ligase E3 component n-recognin 1) Rattus norvegicus
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Symbol: Ubr1
Name: ubiquitin protein ligase E3 component n-recognin 1
Description: Predicted to have leucine binding activity and ubiquitin-protein transferase activity. Predicted to be involved in cellular response to leucine; negative regulation of TOR signaling; and ubiquitin-dependent protein catabolic process. Predicted to localize to proteasome complex and ubiquitin ligase complex. Human ortholog(s) of this gene implicated in Johanson-Blizzard syndrome. Orthologous to human UBR1 (ubiquitin protein ligase E3 component n-recognin 1); INTERACTS WITH 17alpha-ethynylestradiol; bisphenol A; methapyrilene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: E3 ubiquitin-protein ligase UBR1; LOC499877; RGD1562326; similar to ubiquitin-protein ligase E3-alpha
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03112,800,557 - 112,910,038 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3112,800,557 - 112,876,773 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03119,343,521 - 119,453,073 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43107,632,668 - 107,746,611 (-)NCBIRGSC3.4rn4RGSC3.4
Celera3106,718,636 - 106,826,666 (-)NCBICelera
Cytogenetic Map3q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ubr1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1562326
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.