Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: RGD1562378 (histone H4 variant H4-v.1) Rattus norvegicus
Analyze
Symbol: RGD1562378
Name: histone H4 variant H4-v.1
CRRD ID: 1562378
Description: Predicted to have protein domain specific binding activity. Predicted to be involved in DNA replication-dependent nucleosome assembly; DNA replication-independent nucleosome assembly; and negative regulation of megakaryocyte differentiation. Predicted to localize to nuclear nucleosome. Orthologous to human H4C14 (H4 clustered histone 14); PARTICIPATES IN systemic lupus erythematosus pathway; INTERACTS WITH ammonium chloride; furan; manganese(II) chloride.
Type: protein-coding
RefSeq Status: MODEL
Also known as: histone H4; LOC500351
Orthologs:
Homo sapiens (human) : H4C14 (H4 clustered histone 14)  HGNC  Alliance
Mus musculus (house mouse) : H4c8 (H4 clustered histone 8)  MGI  Alliance
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04170,762,862 - 170,763,962 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4170,763,605 - 170,763,916 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04235,021,400 - 235,025,060 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44173,814,632 - 173,815,702 (-)NCBIRGSC3.4rn4RGSC3.4
Celera4158,255,476 - 158,259,136 (-)NCBICelera
Cytogenetic Map4q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on RGD1562378
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1562378
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.