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Gene: Rnft1 (ring finger protein, transmembrane 1) Rattus norvegicus
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Symbol: Rnft1
Name: ring finger protein, transmembrane 1
Description: Predicted to have ubiquitin binding activity and ubiquitin protein ligase activity. Predicted to be involved in positive regulation of ERAD pathway and protein autoubiquitination. Predicted to localize to the endoplasmic reticulum. Orthologous to human RNFT1 (ring finger protein, transmembrane 1); INTERACTS WITH bisphenol A; (-)-epigallocatechin 3-gallate (ortholog); 17alpha-ethynylestradiol (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC360595; RGD1562411; RING finger and transmembrane domain-containing protein 1; ring finger protein, transmembrane 1, pseudogene 1; Rnft1-ps1; similar to RIKEN cDNA 0610013E23
Orthologs:
Homo sapiens (human) : RNFT1 (ring finger protein, transmembrane 1)  HGNC  Alliance
Mus musculus (house mouse) : Rnft1 (ring finger protein, transmembrane 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rnft1 (ring finger protein, transmembrane 1)
Pan paniscus (bonobo/pygmy chimpanzee) : RNFT1 (ring finger protein, transmembrane 1)
Canis lupus familiaris (dog) : RNFT1 (ring finger protein, transmembrane 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rnft1 (ring finger protein, transmembrane 1)
Sus scrofa (pig) : RNFT1 (ring finger protein, transmembrane 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01073,807,455 - 73,821,178 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1073,809,157 - 73,817,982 (+)Ensembl
Rnor_5.01076,278,401 - 76,292,132 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41076,640,223 - 76,651,484 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1070,231,791 - 70,245,501 (+)NCBICelera
Cytogenetic Map10q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rnft1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1562411
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.