Gene: Hoxa13 (homeo box A13) Rattus norvegicus
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Symbol: Hoxa13
Name: homeo box A13
Description: ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN embryonic hindgut morphogenesis; prostate gland development; response to testosterone; ASSOCIATED WITH Anorectal Malformations; hypospadias; Female Urogenital Diseases (ortholog); FOUND IN nucleus (ortholog); INTERACTS WITH 3,7-dihydropurine-6-thione; bisphenol A; dibutyl phthalate
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: homeobox A13; homeobox protein Hox-A13-like; LOC100910298; LOC500129; RGD1562483; similar to transcription factor HOXA13
Orthologs:
Homo sapiens (human) : HOXA13 (homeobox A13)  HGNC  Alliance
Mus musculus (house mouse) : Hoxa13 (homeobox A13)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hoxa13 (homeobox A13)
Pan paniscus (bonobo/pygmy chimpanzee) : HOXA13 (homeobox A13)
Canis lupus familiaris (dog) : HOXA13 (homeobox A13)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hoxa13 (homeobox A13)
Sus scrofa (pig) : HOXA13 (homeobox A13)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_5.04146,980,144 - 146,982,279 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4480,558,841 - 80,561,053NCBIRGSC3.4rn4RGSC3.4
Celera476,249,534 - 76,251,232 (-)NCBICelera
Cytogenetic Map4q24NCBI


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Hoxa13
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1562483
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.