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Gene: Spatc1l (spermatogenesis and centriole associated 1-like) Rattus norvegicus
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Symbol: Spatc1l
Name: spermatogenesis and centriole associated 1-like
Description: Predicted to have protein kinase A regulatory subunit binding activity. Predicted to be involved in several processes, including actin polymerization or depolymerization; positive regulation of cAMP-dependent protein kinase activity; and positive regulation of protein kinase A signaling. Predicted to localize to centrosome and sperm connecting piece. Orthologous to human SPATC1L (spermatogenesis and centriole associated 1 like); INTERACTS WITH dichloroacetic acid (ortholog); lead diacetate (ortholog); lead(0) (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical protein LOC499418; LOC499418; similar to Putative protein C21orf56 homolog; uncharacterized protein LOC499418
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02012,825,789 - 12,835,007 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2013,164,628 - 13,173,774 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl2012,825,775 - 12,835,044 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02014,983,177 - 14,990,480 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.02015,318,495 - 15,327,599 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42012,488,956 - 12,498,060 (-)NCBIRGSC3.4rn4RGSC3.4
Celera2013,572,304 - 13,581,438 (-)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Spatc1l
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1562578
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.