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Gene: Mindy4 (MINDY lysine 48 deubiquitinase 4) Rattus norvegicus
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Symbol: Mindy4
Name: MINDY lysine 48 deubiquitinase 4
Description: Predicted to have Lys48-specific deubiquitinase activity and cysteine-type carboxypeptidase activity. Predicted to be involved in protein K48-linked deubiquitination. Orthologous to human MINDY4 (MINDY lysine 48 deubiquitinase 4); INTERACTS WITH acrylamide; bisphenol A; indole-3-methanol.
Type: protein-coding
RefSeq Status: MODEL
Also known as: Fam188b; family with sequence similarity 188, member B; LOC312365; RGD1562590; similar to hypothetical protein
Orthologs:
Homo sapiens (human) : MINDY4 (MINDY lysine 48 deubiquitinase 4)  HGNC  Alliance
Mus musculus (house mouse) : Mindy4 (MINDY lysine 48 deubiquitinase 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Mindy4 (MINDY lysine 48 deubiquitinase 4)
Pan paniscus (bonobo/pygmy chimpanzee) : MINDY4 (MINDY lysine 48 deubiquitinase 4)
Canis lupus familiaris (dog) : MINDY4 (MINDY lysine 48 deubiquitinase 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Mindy4 (MINDY lysine 48 deubiquitinase 4)
Sus scrofa (pig) : MINDY4 (MINDY lysine 48 deubiquitinase 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0485,427,741 - 85,536,264 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04150,079,958 - 150,188,230 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4483,974,751 - 84,079,264 (+)NCBIRGSC3.4rn4RGSC3.4
Celera479,225,891 - 79,334,406 (+)NCBICelera
Cytogenetic Map4q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Mindy4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1562590
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.