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Gene: Ncapd2 (non-SMC condensin I complex, subunit D2) Rattus norvegicus
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Symbol: Ncapd2
Name: non-SMC condensin I complex, subunit D2
Description: Predicted to have chromatin binding activity and histone binding activity. Predicted to be involved in chromosome separation; meiotic chromosome condensation; and mitotic chromosome condensation. Predicted to colocalize with the cytoplasm and nuclear chromosome. Human ortholog(s) of this gene implicated in primary autosomal recessive microcephaly. Orthologous to human NCAPD2 (non-SMC condensin I complex subunit D2); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 6-propyl-2-thiouracil; acrylamide.
Type: protein-coding
RefSeq Status: MODEL
Also known as: condensin complex subunit 1; LOC362438; LOW QUALITY PROTEIN: condensin complex subunit 1; RGD1562596; similar to mKIAA0159 protein
Orthologs:
Homo sapiens (human) : NCAPD2 (non-SMC condensin I complex subunit D2)  HGNC  Alliance
Mus musculus (house mouse) : Ncapd2 (non-SMC condensin I complex, subunit D2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ncapd2 (non-SMC condensin I complex subunit D2)
Pan paniscus (bonobo/pygmy chimpanzee) : NCAPD2 (non-SMC condensin I complex subunit D2)
Canis lupus familiaris (dog) : NCAPD2 (non-SMC condensin I complex subunit D2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ncapd2 (non-SMC condensin I complex subunit D2)
Sus scrofa (pig) : NCAPD2 (non-SMC condensin I complex subunit D2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04157,682,855 - 157,705,903 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04224,700,039 - 224,722,952 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44161,288,671 - 161,310,417 (-)NCBIRGSC3.4rn4RGSC3.4
Celera4146,705,847 - 146,728,900 (-)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ncapd2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1562596
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.