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Gene: Smyd3 (SET and MYND domain containing 3) Rattus norvegicus
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Symbol: Smyd3
Name: SET and MYND domain containing 3
Description: Predicted to have RNA polymerase II complex binding activity; RNA polymerase II regulatory region sequence-specific DNA binding activity; and histone-lysine N-methyltransferase activity. Predicted to be involved in several processes, including cellular response to dexamethasone stimulus; nucleosome assembly; and regulation of protein phosphorylation. Predicted to localize to the cytosol and nucleoplasm. Orthologous to human SMYD3 (SET and MYND domain containing 3); PARTICIPATES IN histone modification pathway; INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: histone-lysine N-methyltransferase SMYD3; LOC498295; MGC114517; SET and MYND domain-containing protein 3; similar to SET and MYND domain containing 3
Orthologs:
Homo sapiens (human) : SMYD3 (SET and MYND domain containing 3)  HGNC  Alliance
Mus musculus (house mouse) : Smyd3 (SET and MYND domain containing 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Smyd3 (SET and MYND domain containing 3)
Pan paniscus (bonobo/pygmy chimpanzee) : SMYD3 (SET and MYND domain containing 3)
Canis lupus familiaris (dog) : SMYD3 (SET and MYND domain containing 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Smyd3 (SET and MYND domain containing 3)
Sus scrofa (pig) : SMYD3 (SET and MYND domain containing 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly; Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01397,330,120 - 97,807,813 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.013102,350,012 - 102,473,942 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.013102,581,420 - 102,588,971 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41394,643,716 - 95,108,789 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1390,265,163 - 90,818,620 (-)NCBICelera
Cytogenetic Map13q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Smyd3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1562635
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.