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Gene: Atxn7 (ataxin 7) Rattus norvegicus
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Symbol: Atxn7
Name: ataxin 7
Description: Predicted to have chromatin binding activity. Predicted to be involved in several processes, including histone deubiquitination; negative regulation of insulin-like growth factor receptor signaling pathway; and negative regulation of microtubule depolymerization. Predicted to localize to cytosol; microtubule cytoskeleton; and nucleoplasm. Human ortholog(s) of this gene implicated in spinocerebellar ataxia type 7. Orthologous to human ATXN7 (ataxin 7); PARTICIPATES IN RNA polymerase II transcription initiation pathway; INTERACTS WITH amphetamine; chloroprene; flutamide.
Type: protein-coding
RefSeq Status: MODEL
Also known as: ataxin-7; LOC361015; RGD1562692; similar to spinocerebellar ataxia 7 homolog
Orthologs:
Homo sapiens (human) : ATXN7 (ataxin 7)  HGNC  Alliance
Mus musculus (house mouse) : Atxn7 (ataxin 7)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atxn7 (ataxin 7)
Pan paniscus (bonobo/pygmy chimpanzee) : ATXN7 (ataxin 7)
Canis lupus familiaris (dog) : ATXN7 (ataxin 7)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atxn7 (ataxin 7)
Sus scrofa (pig) : ATXN7 (ataxin 7)
Chlorocebus sabaeus (African green monkey) : ATXN7 (ataxin 7)
Heterocephalus glaber (naked mole-rat) : Atxn7 (ataxin 7)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01512,421,432 - 12,569,649 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1512,425,175 - 12,513,931 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01516,452,707 - 16,597,558 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41512,669,541 - 12,758,262 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1511,124,309 - 11,269,085 (-)NCBICelera
Cytogenetic Map15p16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Atxn7
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1562692
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.