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Gene: Trim72 (tripartite motif containing 72) Rattus norvegicus
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Symbol: Trim72
Name: tripartite motif containing 72
Description: Predicted to have phosphatidylserine binding activity; ubiquitin conjugating enzyme binding activity; and ubiquitin protein ligase activity. Predicted to be involved in several processes, including cellular protein metabolic process; negative regulation of signal transduction; and plasma membrane repair. Predicted to localize to the cytoplasmic vesicle membrane and sarcolemma. Orthologous to human TRIM72 (tripartite motif containing 72); INTERACTS WITH (RS)-amphetamine; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC365377; mg53; MGC156817; mitsugumin-53; RGD1562778; similar to tripartite motif protein 50; tripartite motif containing 72, E3 ubiquitin protein ligase; tripartite motif-containing 72; tripartite motif-containing protein 72
Orthologs:
Homo sapiens (human) : TRIM72 (tripartite motif containing 72)  HGNC  Alliance
Mus musculus (house mouse) : Trim72 (tripartite motif-containing 72)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trim72 (tripartite motif containing 72)
Pan paniscus (bonobo/pygmy chimpanzee) : TRIM72 (tripartite motif containing 72)
Canis lupus familiaris (dog) : TRIM72 (tripartite motif containing 72)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trim72 (tripartite motif containing 72)
Sus scrofa (pig) : TRIM72 (tripartite motif containing 72)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01199,450,042 - 199,457,902 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01206,472,896 - 206,480,756 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41187,288,102 - 187,295,962 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1180,264,527 - 180,272,377 (+)NCBICelera
Cytogenetic Map1q37NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Trim72
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1562778
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.