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Gene: Lime1 (Lck interacting transmembrane adaptor 1) Rattus norvegicus
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Symbol: Lime1
Name: Lck interacting transmembrane adaptor 1
CRRD ID: 1562795
Description: Predicted to have protein kinase binding activity. Predicted to be involved in several processes, including B cell receptor signaling pathway; regulation of intracellular signal transduction; and regulation of release of sequestered calcium ion into cytosol. Predicted to localize to B cell receptor complex. Orthologous to human LIME1 (Lck interacting transmembrane adaptor 1); INTERACTS WITH aflatoxin B1; amphetamine; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: lck-interacting transmembrane adapter 1; LOC362289; RGD1562795; similar to Lck-interacting transmembrane adaptor protein LIME
Orthologs:
Homo sapiens (human) : LIME1 (Lck interacting transmembrane adaptor 1)  HGNC  Alliance
Mus musculus (house mouse) : Lime1 (Lck interacting transmembrane adaptor 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lime1 (Lck interacting transmembrane adaptor 1)
Pan paniscus (bonobo/pygmy chimpanzee) : LIME1 (Lck interacting transmembrane adaptor 1)
Canis lupus familiaris (dog) : LIME1 (Lck interacting transmembrane adaptor 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lime1 (Lck interacting transmembrane adaptor 1)
Sus scrofa (pig) : LIME1 (Lck interacting transmembrane adaptor 1)
Chlorocebus sabaeus (African green monkey) : LIME1 (Lck interacting transmembrane adaptor 1)
Heterocephalus glaber (naked mole-rat) : Lime1 (Lck interacting transmembrane adaptor 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03176,881,881 - 176,888,230 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3176,882,027 - 176,884,350 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03180,591,825 - 180,598,362 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43170,522,420 - 170,524,743 (+)NCBIRGSC3.4rn4RGSC3.4
Celera3164,093,412 - 164,095,735 (-)NCBICelera
Cytogenetic Map3q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Lime1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1562795
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.