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Gene: Zscan20 (zinc finger and SCAN domain containing 20) Rattus norvegicus
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Symbol: Zscan20
Name: zinc finger and SCAN domain containing 20
Description: Predicted to have DNA-binding transcription factor activity; metal ion binding activity; and nucleic acid binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to localize to nucleus. Orthologous to human ZSCAN20 (zinc finger and SCAN domain containing 20); INTERACTS WITH amphetamine; endosulfan; (-)-demecolcine (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC500549; RGD1562996; similar to Zfp31 protein; zinc finger and SCAN domain-containing protein 20; zinc finger and SCAN domains 20
Orthologs:
Homo sapiens (human) : ZSCAN20 (zinc finger and SCAN domain containing 20)  HGNC  Alliance
Mus musculus (house mouse) : Zscan20 (zinc finger and SCAN domains 20)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Zscan20 (zinc finger and SCAN domain containing 20)
Pan paniscus (bonobo/pygmy chimpanzee) : ZSCAN20 (zinc finger and SCAN domain containing 20)
Canis lupus familiaris (dog) : ZSCAN20 (zinc finger and SCAN domain containing 20)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Zscan20 (zinc finger and SCAN domain containing 20)
Sus scrofa (pig) : ZSCAN20 (zinc finger and SCAN domain containing 20)
Chlorocebus sabaeus (African green monkey) : ZSCAN20 (zinc finger and SCAN domain containing 20)
Heterocephalus glaber (naked mole-rat) : Zscan20 (zinc finger and SCAN domain containing 20)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05146,760,822 - 146,788,945 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5146,762,683 - 146,787,676 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05150,499,839 - 150,527,856 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45147,812,430 - 147,831,362 (-)NCBIRGSC3.4rn4RGSC3.4
Celera5139,413,972 - 139,442,095 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Zscan20
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1562996
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-07-28
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.