Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Ctc1 (CST telomere replication complex component 1) Rattus norvegicus
Analyze
Symbol: Ctc1
Name: CST telomere replication complex component 1
Description: Predicted to have G-rich strand telomeric DNA binding activity. Predicted to be involved in several processes, including hematopoietic or lymphoid organ development; regulation of cellular macromolecule biosynthetic process; and replicative senescence. Predicted to localize to CST complex and nuclear chromosome, telomeric region. Orthologous to human CTC1 (CST telomere replication complex component 1); INTERACTS WITH amphetamine; bisphenol A; endosulfan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: CST complex subunit CTC1; CTS telomere maintenance complex component 1; hypothetical protein LOC303238; LOC303238; RGD1563106; similar to novel protein
Orthologs:
Homo sapiens (human) : CTC1 (CST telomere replication complex component 1)  HGNC  Alliance
Mus musculus (house mouse) : Ctc1 (CTS telomere maintenance complex component 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ctc1 (CST telomere replication complex component 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CTC1 (CST telomere replication complex component 1)
Canis lupus familiaris (dog) : CTC1 (CST telomere replication complex component 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ctc1 (CST telomere replication complex component 1)
Sus scrofa (pig) : CTC1 (CST telomere replication complex component 1)
Chlorocebus sabaeus (African green monkey) : CTC1 (CST telomere replication complex component 1)
Heterocephalus glaber (naked mole-rat) : Ctc1 (CST telomere replication complex component 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01055,596,172 - 55,616,873 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1055,596,148 - 55,616,889 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01055,339,019 - 55,359,676 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41055,768,182 - 55,788,836 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1052,880,876 - 52,901,530 (+)NCBICelera
Cytogenetic Map10q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ctc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1563106
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.