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Gene: Slx4ip (SLX4 interacting protein) Rattus norvegicus
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Symbol: Slx4ip
Name: SLX4 interacting protein
Description: Orthologous to human SLX4IP (SLX4 interacting protein); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; atrazine; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC102549953; LOC499895; RGD1563120; similar to RIKEN cDNA 2210009G21; uncharacterized LOC102549953; uncharacterized protein LOC499895
Orthologs:
Homo sapiens (human) : SLX4IP (SLX4 interacting protein)  HGNC  Alliance
Mus musculus (house mouse) : Slx4ip (SLX4 interacting protein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slx4ip (SLX4 interacting protein)
Pan paniscus (bonobo/pygmy chimpanzee) : SLX4IP (SLX4 interacting protein)
Canis lupus familiaris (dog) : SLX4IP (SLX4 interacting protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slx4ip (SLX4 interacting protein)
Sus scrofa (pig) : SLX4IP (SLX4 interacting protein)
Chlorocebus sabaeus (African green monkey) : SLX4IP (SLX4 interacting protein)
Heterocephalus glaber (naked mole-rat) : Slx4ip (SLX4 interacting protein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03129,884,871 - 130,069,371 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3129,885,826 - 130,069,390 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03136,489,186 - 136,545,079 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43125,104,880 - 125,167,452 (+)NCBIRGSC3.4rn4RGSC3.4
Celera3122,940,057 - 123,112,478 (+)NCBICelera
Cytogenetic Map3q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Slx4ip
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1563120
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.