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Gene: Ythdc2 (YTH domain containing 2) Rattus norvegicus
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Symbol: Ythdc2
Name: YTH domain containing 2
Description: Predicted to have ATPase activity; N6-methyladenosine-containing RNA binding activity; and RNA polymerase binding activity. Predicted to be involved in several processes, including germ cell development; germline cell cycle switching, mitotic to meiotic cell cycle; and positive regulation by host of viral genome replication. Predicted to colocalize with the endoplasmic reticulum. Orthologous to human YTHDC2 (YTH domain containing 2); INTERACTS WITH bisphenol A; vinclozolin; (-)-demecolcine (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC307446; LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase YTHDC2; probable ATP-dependent RNA helicase YTHDC2; RGD1563192; similar to YTH domain containing 2; YTH domain containing 2-like
Orthologs:
Homo sapiens (human) : YTHDC2 (YTH domain containing 2)  HGNC  Alliance
Mus musculus (house mouse) : Ythdc2 (YTH domain containing 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ythdc2 (YTH domain containing 2)
Pan paniscus (bonobo/pygmy chimpanzee) : YTHDC2 (YTH domain containing 2)
Canis lupus familiaris (dog) : YTHDC2 (YTH domain containing 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ythdc2 (YTH domain containing 2)
Sus scrofa (pig) : YTHDC2 (YTH domain containing 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01182,072,386 - 182,141,399 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01189,044,738 - 189,112,000 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41838,587,783 - 38,600,826NCBIRGSC3.4rn4RGSC3.4
Cytogenetic Map1q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ythdc2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1563192
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.