Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: RGD1563323 (similar to hypothetical protein FLJ22531) Rattus norvegicus
Analyze
Symbol: RGD1563323
Name: similar to hypothetical protein FLJ22531
Description: Predicted to be involved in meiotic DNA double-strand break formation and reciprocal meiotic recombination. Orthologous to human C11orf80 (chromosome 11 open reading frame 80); INTERACTS WITH bisphenol A; aflatoxin B1 (ortholog); benzo[a]pyrene (ortholog).
Type: gene
RefSeq Status: MODEL
Also known as: LOC100361773; LOC361702; ribosomal protein L7A-like
Orthologs:
Homo sapiens (human) : C11orf80 (chromosome 11 open reading frame 80)  HGNC  Alliance
Mus musculus (house mouse) : Gm960 (predicted gene 960)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102019710 (chromosome unknown open reading frame, human C11orf80)
Pan paniscus (bonobo/pygmy chimpanzee) : C11H11orf80 (chromosome 11 C11orf80 homolog)
Canis lupus familiaris (dog) : C18H11orf80 (chromosome 18 C11orf80 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : CUNH11orf80 (chromosome unknown C11orf80 homolog)
Sus scrofa (pig) : C2H11orf80 (chromosome 2 C11orf80 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01219,864,108 - 219,952,143 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01226,730,584 - 226,815,773 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41207,216,918 - 207,268,811 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1199,443,532 - 199,531,195 (-)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on RGD1563323
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1563323
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.