Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Zfp536 (zinc finger protein 536) Rattus norvegicus
Analyze
Symbol: Zfp536
Name: zinc finger protein 536
Description: Predicted to have DNA-binding transcription repressor activity, RNA polymerase II-specific and retinoic acid-responsive element binding activity. Predicted to be involved in negative regulation of neuron differentiation; negative regulation of retinoic acid receptor signaling pathway; and negative regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Orthologous to human ZNF536 (zinc finger protein 536); INTERACTS WITH bisphenol A; glyphosate; 2-methylcholine (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC292820; RGD1563363; similar to Zfp536 protein; Znf536
Orthologs:
Homo sapiens (human) : ZNF536 (zinc finger protein 536)  HGNC  Alliance
Mus musculus (house mouse) : Zfp536 (zinc finger protein 536)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Znf536 (zinc finger protein 536)
Pan paniscus (bonobo/pygmy chimpanzee) : ZNF536 (zinc finger protein 536)
Canis lupus familiaris (dog) : ZNF536 (zinc finger protein 536)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Znf536 (zinc finger protein 536)
Sus scrofa (pig) : ZNF536 (zinc finger protein 536)
Chlorocebus sabaeus (African green monkey) : ZNF536 (zinc finger protein 536)
Heterocephalus glaber (naked mole-rat) : Znf536 (zinc finger protein 536)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0193,689,114 - 94,155,457 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl193,851,454 - 93,949,187 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0194,797,493 - 95,255,540 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4189,794,391 - 90,036,876 (-)NCBIRGSC3.4rn4RGSC3.4
Celera184,340,585 - 84,798,221 (-)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Zfp536
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1563363
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.