Gene: Acod1 (aconitate decarboxylase 1) Rattus norvegicus
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Symbol: Acod1
Name: aconitate decarboxylase 1
Description: Predicted to have 2-methylcitrate dehydratase activity and aconitate decarboxylase activity; predicted to be involved in several processes, including cellular response to cytokine stimulus, cellular response to lipid, and regulation of defense response; predicted to localize to the mitochondrion; orthologous to human ACOD1 (aconitate decarboxylase 1); INTERACTS WITH 1-naphthyl isothiocyanate; 3,7-dihydropurine-6-thione; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cis-aconitate decarboxylase; immunoresponsive 1 homolog; immunoresponsive 1 homolog (mouse); immunoresponsive gene 1; Irg1; LOC306127; RGD1563454; similar to IMMUNE-RESPONSIVE PROTEIN 1
Orthologs:
Homo sapiens (human) : ACOD1 (aconitate decarboxylase 1)  HGNC  Alliance
Mus musculus (house mouse) : Acod1 (aconitate decarboxylase 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Acod1 (aconitate decarboxylase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : ACOD1 (aconitate decarboxylase 1)
Canis lupus familiaris (dog) : ACOD1 (aconitate decarboxylase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Acod1 (aconitate decarboxylase 1)
Sus scrofa (pig) : ACOD1 (aconitate decarboxylase 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01593,612,968 - 93,622,322 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01597,100,761 - 97,110,112 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41587,056,688 - 87,066,471 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1579,013,093 - 79,021,717 (+)NCBICelera
Cytogenetic Map15q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Acod1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1563454
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.