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Gene: Ckap5 (cytoskeleton associated protein 5) Rattus norvegicus
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Symbol: Ckap5
Name: cytoskeleton associated protein 5
Description: Predicted to be involved in microtubule cytoskeleton organization. Predicted to colocalize with the gamma-tubulin complex and microtubule plus-end. Orthologous to human CKAP5 (cytoskeleton associated protein 5); INTERACTS WITH 2,6-dinitrotoluene; bisphenol A; methapyrilene.
Type: protein-coding
RefSeq Status: MODEL
Also known as: cytoskeleton-associated protein 5; LOC311191; similar to colonic and hepatic tumor over-expressed protein isoform a
Orthologs:
Homo sapiens (human) : CKAP5 (cytoskeleton associated protein 5)  HGNC  Alliance
Mus musculus (house mouse) : Ckap5 (cytoskeleton associated protein 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ckap5 (cytoskeleton associated protein 5)
Pan paniscus (bonobo/pygmy chimpanzee) : CKAP5 (cytoskeleton associated protein 5)
Canis lupus familiaris (dog) : CKAP5 (cytoskeleton associated protein 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ckap5 (cytoskeleton associated protein 5)
Sus scrofa (pig) : CKAP5 (cytoskeleton associated protein 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0380,424,320 - 80,526,583 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl380,468,154 - 80,526,593 (+)Ensembl
Rnor_5.0387,124,448 - 87,225,813 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4375,903,605 - 76,002,422 (+)NCBIRGSC3.4rn4RGSC3.4
Celera376,696,182 - 76,798,097 (+)NCBICelera
Cytogenetic Map3q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ckap5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1563596
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.