Gene: Cactin (cactin, spliceosome C complex subunit) Rattus norvegicus
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Symbol: Cactin
Name: cactin, spliceosome C complex subunit
Description: Predicted to be involved in several processes, including cellular response to cytokine stimulus, negative regulation of cytokine production, and negative regulation of signal transduction; predicted to localize to the catalytic step 2 spliceosome, cytosol, and nuclear speck; orthologous to human CACTIN (cactin, spliceosome C complex subunit); INTERACTS WITH bisphenol A; cadmium dichloride; endosulfan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC500790; RGD1563634; similar to R31449_3
Orthologs:
Homo sapiens (human) : CACTIN (cactin, spliceosome C complex subunit)  HGNC  Alliance
Mus musculus (house mouse) : Cactin (cactin, spliceosome C complex subunit)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cactin (cactin, spliceosome C complex subunit)
Pan paniscus (bonobo/pygmy chimpanzee) : CACTIN (cactin, spliceosome C complex subunit)
Canis lupus familiaris (dog) : CACTIN (cactin, spliceosome C complex subunit)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cactin (cactin, spliceosome C complex subunit)
Sus scrofa (pig) : CACTIN (cactin, spliceosome C complex subunit)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0711,258,526 - 11,266,509 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0711,423,847 - 11,433,847 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.479,875,757 - 9,880,563 (-)NCBIRGSC3.4rn4RGSC3.4
Celera76,580,348 - 6,585,153 (-)NCBICelera
Cytogenetic Map7q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Cactin
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1563634
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.