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Gene: Spata16 (spermatogenesis associated 16) Rattus norvegicus
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Symbol: Spata16
Name: spermatogenesis associated 16
Description: Predicted to be involved in spermatogenesis. Predicted to localize to the Golgi apparatus. Human ortholog(s) of this gene implicated in spermatogenic failure 6. Orthologous to human SPATA16 (spermatogenesis associated 16); INTERACTS WITH bisphenol A; aflatoxin B1 (ortholog); potassium dichromate (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC294932; RGD1563726; similar to Nyd-sp12 protein; spermatogenesis-associated protein 16
Orthologs:
Homo sapiens (human) : SPATA16 (spermatogenesis associated 16)  HGNC  Alliance
Mus musculus (house mouse) : Spata16 (spermatogenesis associated 16)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Spata16 (spermatogenesis associated 16)
Pan paniscus (bonobo/pygmy chimpanzee) : SPATA16 (spermatogenesis associated 16)
Canis lupus familiaris (dog) : SPATA16 (spermatogenesis associated 16)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Spata16 (spermatogenesis associated 16)
Sus scrofa (pig) : SPATA16 (spermatogenesis associated 16)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02112,281,326 - 112,659,911 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02132,316,091 - 132,380,997 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.02132,001,122 - 132,294,134 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42112,490,919 - 112,853,681 (+)NCBIRGSC3.4rn4RGSC3.4
Celera2104,707,131 - 105,078,173 (+)NCBICelera
Cytogenetic Map2q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Spata16
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1563726
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.