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Gene: Hoxc13 (homeobox C13) Rattus norvegicus
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Symbol: Hoxc13
Name: homeobox C13
CRRD ID: 1563984
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific and chromatin binding activity. Predicted to be involved in several processes, including hair follicle development; nail development; and tongue morphogenesis. Predicted to localize to nucleus. Human ortholog(s) of this gene implicated in ectodermal dysplasia 9. Orthologous to human HOXC13 (homeobox C13); INTERACTS WITH bisphenol A; copper atom; copper(0).
Type: protein-coding
RefSeq Status: MODEL
Also known as: homeobox protein Hox-C13; LOC315337; RGD1563984; similar to homeodomain protein
Orthologs:
Homo sapiens (human) : HOXC13 (homeobox C13)  HGNC  Alliance
Mus musculus (house mouse) : Hoxc13 (homeobox C13)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hoxc13 (homeobox C13)
Pan paniscus (bonobo/pygmy chimpanzee) : HOXC13 (homeobox C13)
Canis lupus familiaris (dog) : HOXC13 (homeobox C13)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hoxc13 (homeobox C13)
Sus scrofa (pig) : HOXC13 (homeobox C13)
Chlorocebus sabaeus (African green monkey) : HOXC13 (homeobox C13)
Heterocephalus glaber (naked mole-rat) : Hoxc13 (homeobox C13)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07144,531,814 - 144,538,298 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7144,531,814 - 144,537,966 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07142,323,171 - 142,329,323 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47141,685,004 - 141,691,159 (+)NCBIRGSC3.4rn4RGSC3.4
Celera7130,489,719 - 130,491,373 (+)NCBICelera
Cytogenetic Map7q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Hoxc13
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1563984
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.