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Gene: Arhgap42 (Rho GTPase activating protein 42) Rattus norvegicus
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Symbol: Arhgap42
Name: Rho GTPase activating protein 42
Description: Predicted to have GTPase activator activity. Predicted to be involved in several processes, including activation of GTPase activity; negative regulation of Rho protein signal transduction; and negative regulation of vascular smooth muscle contraction. Orthologous to human ARHGAP42 (Rho GTPase activating protein 42); INTERACTS WITH (+)-schisandrin B; 3,3',5,5'-tetrabromobisphenol A; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC500943; RGD1564081; rho GTPase-activating protein 42; similar to novel protein similar to human oligophrenin 1 (OPHN1)
Orthologs:
Homo sapiens (human) : ARHGAP42 (Rho GTPase activating protein 42)  HGNC  Alliance
Mus musculus (house mouse) : Arhgap42 (Rho GTPase activating protein 42)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Arhgap42 (Rho GTPase activating protein 42)
Pan paniscus (bonobo/pygmy chimpanzee) : ARHGAP42 (Rho GTPase activating protein 42)
Canis lupus familiaris (dog) : ARHGAP42 (Rho GTPase activating protein 42)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Arhgap42 (Rho GTPase activating protein 42)
Sus scrofa (pig) : ARHGAP42 (Rho GTPase activating protein 42)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.087,210,999 - 7,446,215 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.087,195,968 - 7,426,711 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.485,871,794 - 6,101,228 (-)NCBIRGSC3.4rn4RGSC3.4
Celera87,691,250 - 7,919,838 (-)NCBICelera
Cytogenetic Map8q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Arhgap42
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1564081
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.