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Gene: Ccn6 (cellular communication network factor 6) Rattus norvegicus
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Symbol: Ccn6
Name: cellular communication network factor 6
CRRD ID: 1564120
Description: Predicted to have heparin binding activity and integrin binding activity. Predicted to be involved in several processes, including negative regulation of angiogenesis; regulation of mitochondrial membrane potential; and regulation of reactive oxygen species biosynthetic process. Predicted to localize to several cellular components, including endoplasmic reticulum; extracellular space; and mitochondrion. Human ortholog(s) of this gene implicated in progressive pseudorheumatoid arthropathy of childhood. Orthologous to human CCN6 (cellular communication network factor 6); INTERACTS WITH 6-propyl-2-thiouracil; amphetamine; bisphenol A.
Type: protein-coding
RefSeq Status: INFERRED
Also known as: LOC499461; RGD1564120; similar to WNT1 inducible signaling pathway protein 3 precursor (WISP-3) ; similar to WNT1 inducible signaling pathway protein 3 precursor (WISP-3) (UNQ462/PRO790); Wisp3; WNT1 inducible signaling pathway protein 3; WNT1-inducible-signaling pathway protein 3
Orthologs:
Homo sapiens (human) : CCN6 (cellular communication network factor 6)  HGNC  Alliance
Mus musculus (house mouse) : Ccn6 (cellular communication network factor 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ccn6 (cellular communication network factor 6)
Pan paniscus (bonobo/pygmy chimpanzee) : CCN6 (cellular communication network factor 6)
Canis lupus familiaris (dog) : CCN6 (cellular communication network factor 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ccn6 (cellular communication network factor 6)
Sus scrofa (pig) : CCN6 (cellular communication network factor 6)
Chlorocebus sabaeus (African green monkey) : CCN6 (cellular communication network factor 6)
Heterocephalus glaber (naked mole-rat) : Ccn6 (cellular communication network factor 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02044,237,491 - 44,255,064 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2044,237,491 - 44,255,064 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02045,964,515 - 45,980,204 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42043,297,076 - 43,312,790 (-)NCBIRGSC3.4rn4RGSC3.4
Celera2043,285,682 - 43,301,319 (-)NCBICelera
Cytogenetic Map20q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ccn6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1564120
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.