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Gene: Msr1 (macrophage scavenger receptor 1) Rattus norvegicus
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Symbol: Msr1
Name: macrophage scavenger receptor 1
Description: Predicted to have amyloid-beta binding activity; cargo receptor activity; and low-density lipoprotein particle binding activity. Involved in cellular response to organic cyclic compound. Localizes to the cytoplasmic vesicle; cytosol; and plasma membrane. Human ortholog(s) of this gene implicated in Barrett's esophagus; arteriosclerosis; and prostate cancer. Orthologous to human MSR1 (macrophage scavenger receptor 1); PARTICIPATES IN phagocytosis pathway; INTERACTS WITH 1,2-dimethylhydrazine; bisphenol A; furosemide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC498638; macrophage scavenger receptor types I and II; RGD1564316; similar to scavenger receptor type A SR-A
Orthologs:
Homo sapiens (human) : MSR1 (macrophage scavenger receptor 1)  HGNC  Alliance
Mus musculus (house mouse) : Msr1 (macrophage scavenger receptor 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Msr1 (macrophage scavenger receptor 1)
Pan paniscus (bonobo/pygmy chimpanzee) : MSR1 (macrophage scavenger receptor 1)
Canis lupus familiaris (dog) : MSR1 (macrophage scavenger receptor 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Msr1 (macrophage scavenger receptor 1)
Sus scrofa (pig) : MSR1 (macrophage scavenger receptor 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01656,817,714 - 56,900,025 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01656,516,982 - 56,597,180 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41656,278,223 - 56,345,472 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1650,621,592 - 50,686,791 (+)NCBICelera
Cytogenetic Map16q12.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Msr1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1564316
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.