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Gene: Lrsam1 (leucine rich repeat and sterile alpha motif containing 1) Rattus norvegicus
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Symbol: Lrsam1
Name: leucine rich repeat and sterile alpha motif containing 1
Description: Predicted to have ubiquitin protein ligase activity. Predicted to be involved in several processes, including positive regulation of macroautophagy; protein ubiquitination; and ubiquitin-dependent endocytosis. Predicted to localize to cytosol and membrane. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease axonal type 2P. Orthologous to human LRSAM1 (leucine rich repeat and sterile alpha motif containing 1); INTERACTS WITH bisphenol A; dibutyl phthalate; endosulfan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: E3 ubiquitin-protein ligase LRSAM1; LOC311866; RGD1564403; similar to Leucine rich repeat and sterile alpha motif containing 1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly; Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0311,970,401 - 12,009,463 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl311,972,813 - 12,007,570 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0317,306,364 - 17,346,096 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4311,911,191 - 11,951,806 (-)NCBIRGSC3.4rn4RGSC3.4
Celera310,962,858 - 11,003,030 (-)NCBICelera
Cytogenetic Map3p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Lrsam1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1564403
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.