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Gene: LOC308990 (hypothetical protein LOC308990) Rattus norvegicus
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Symbol: LOC308990
Name: hypothetical protein LOC308990
Description: Predicted to localize to integral component of membrane. Orthologous to human C16orf54 (chromosome 16 open reading frame 54); INTERACTS WITH bisphenol A; antirheumatic drug (ortholog); nickel atom (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC108906; MGC108938; transmembrane protein C16orf54 homolog
Orthologs:
Homo sapiens (human) : C16orf54 (chromosome 16 open reading frame 54)  HGNC  Alliance
Mus musculus (house mouse) : AI467606 (expressed sequence AI467606)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102010497 (chromosome unknown open reading frame, human C16orf54)
Pan paniscus (bonobo/pygmy chimpanzee) : CUNH16orf54 (chromosome unknown C16orf54 homolog)
Canis lupus familiaris (dog) : C6H16orf54 (chromosome 6 C16orf54 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : CUNH16orf54 (chromosome unknown C16orf54 homolog)
Sus scrofa (pig) : C3H16orf54 (chromosome 3 C16orf54 homolog)
Chlorocebus sabaeus (African green monkey) : C5H16orf54 (chromosome 5 open reading frame, human C16orf54)
Heterocephalus glaber (naked mole-rat) : CUNH16orf54 (chromosome unknown C16orf54 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01198,528,569 - 198,531,585 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1198,528,635 - 198,531,201 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01205,519,013 - 205,521,654 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41186,342,892 - 186,345,460 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1179,355,577 - 179,358,152 (+)NCBICelera
Cytogenetic Map1q37NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on LOC308990
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1564503
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.