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Gene: Pnpla6 (patatin-like phospholipase domain containing 6) Rattus norvegicus
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Symbol: Pnpla6
Name: patatin-like phospholipase domain containing 6
Description: Predicted to have lysophospholipase activity. Predicted to be involved in angiogenesis and animal organ morphogenesis. Predicted to localize to endoplasmic reticulum. Human ortholog(s) of this gene implicated in Boucher-Neuhauser syndrome; Laurence-Moon syndrome; Oliver-McFarlane syndrome; and hereditary spastic paraplegia 39. Orthologous to human PNPLA6 (patatin like phospholipase domain containing 6); PARTICIPATES IN glycerophospholipid metabolic pathway; INTERACTS WITH bisphenol A; carbaryl; cyclosporin A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC360753; neuropathy target esterase; RGD1564611; similar to neuropathy target esterase homolog
Orthologs:
Homo sapiens (human) : PNPLA6 (patatin like phospholipase domain containing 6)  HGNC  Alliance
Mus musculus (house mouse) : Pnpla6 (patatin-like phospholipase domain containing 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pnpla6 (patatin like phospholipase domain containing 6)
Pan paniscus (bonobo/pygmy chimpanzee) : PNPLA6 (patatin like phospholipase domain containing 6)
Canis lupus familiaris (dog) : PNPLA6 (patatin like phospholipase domain containing 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pnpla6 (patatin like phospholipase domain containing 6)
Sus scrofa (pig) : PNPLA6 (patatin like phospholipase domain containing 6)
Chlorocebus sabaeus (African green monkey) : PNPLA6 (patatin like phospholipase domain containing 6)
Heterocephalus glaber (naked mole-rat) : Pnpla6 (patatin like phospholipase domain containing 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0122,068,749 - 2,098,139 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl122,069,959 - 2,097,904 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0124,232,111 - 4,260,327 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4122,610,552 - 2,638,753 (-)NCBIRGSC3.4rn4RGSC3.4
Celera123,430,758 - 3,460,163 (+)NCBICelera
Cytogenetic Map12p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pnpla6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1564611
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-03-31
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.