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Gene: Shisa6 (shisa family member 6) Rattus norvegicus
Symbol: Shisa6
Name: shisa family member 6
Description: Predicted to have PDZ domain binding activity and ionotropic glutamate receptor binding activity. Predicted to be involved in several processes, including excitatory chemical synaptic transmission; postsynaptic neurotransmitter receptor diffusion trapping; and regulation of neurotransmitter receptor activity. Predicted to localize to the AMPA glutamate receptor complex; asymmetric, glutamatergic, excitatory synapse; and synaptic membrane. Orthologous to human SHISA6 (shisa family member 6); INTERACTS WITH bisphenol A; all-trans-retinoic acid (ortholog); carbamazepine (ortholog).
Type: protein-coding
RefSeq Status: INFERRED
Also known as: LOC497926; protein shisa-6 homolog; RGD1564618; shisa homolog 6; shisa homolog 6 (Xenopus laevis); similar to novel protein
Homo sapiens (human) : SHISA6 (shisa family member 6)  HGNC  Alliance
Mus musculus (house mouse) : Shisa6 (shisa family member 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Shisa6 (shisa family member 6)
Pan paniscus (bonobo/pygmy chimpanzee) : SHISA6 (shisa family member 6)
Canis lupus familiaris (dog) : SHISA6 (shisa family member 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : LOC101959444 (protein shisa-6 homolog)
Sus scrofa (pig) : SHISA6 (shisa family member 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01052,744,069 - 53,037,853 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01052,498,328 - 52,791,670 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41052,896,362 - 53,190,809 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1050,092,476 - 50,378,235 (-)NCBICelera
Cytogenetic Map10q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)

References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
More on Shisa6
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1564618
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.