Gene: Pkd1l1 (polycystin 1 like 1, transient receptor potential channel interacting) Rattus norvegicus
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Symbol: Pkd1l1
Name: polycystin 1 like 1, transient receptor potential channel interacting
Description: Predicted to have calcium channel activity; predicted to be involved in several processes, including detection of mechanical stimulus, detection of nodal flow, and heart development; predicted to localize to the calcium channel complex and non-motile cilium; orthologous to human PKD1L1 (polycystin 1 like 1, transient receptor potential channel interacting); INTERACTS WITH bisphenol A; endosulfan; aflatoxin B1 (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC289796; polycystic kidney disease 1 like 1; polycystic kidney disease protein 1-like 1; RGD1564724; RGD1566034; similar to polycystic kidney disease 1 like 1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01489,047,949 - 89,193,579 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01488,849,130 - 88,972,494 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41489,228,061 - 89,410,326 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1482,589,392 - 82,724,417 (-)NCBICelera
Cytogenetic Map14q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Pkd1l1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1564724
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.