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Gene: Pkd1l1 (polycystin 1 like 1, transient receptor potential channel interacting) Rattus norvegicus
Symbol: Pkd1l1
Name: polycystin 1 like 1, transient receptor potential channel interacting
Description: Predicted to have calcium channel activity. Predicted to be involved in several processes, including detection of mechanical stimulus; detection of nodal flow; and left/right axis specification. Predicted to localize to calcium channel complex and non-motile cilium. Human ortholog(s) of this gene implicated in visceral heterotaxy. Orthologous to human PKD1L1 (polycystin 1 like 1, transient receptor potential channel interacting); INTERACTS WITH bisphenol A; endosulfan; glyphosate.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC289796; polycystic kidney disease 1 like 1; polycystic kidney disease protein 1-like 1; RGD1564724; RGD1566034; similar to polycystic kidney disease 1 like 1
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01489,047,949 - 89,193,579 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1489,060,447 - 89,179,507 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01488,849,130 - 88,972,494 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41489,228,061 - 89,410,326 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1482,589,392 - 82,724,417 (-)NCBICelera
Cytogenetic Map14q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
More on Pkd1l1
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1564724
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.