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Gene: Heatr1 (HEAT repeat containing 1) Rattus norvegicus
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Symbol: Heatr1
Name: HEAT repeat containing 1
CRRD ID: 1564769
Description: Predicted to have snoRNA binding activity. Predicted to be involved in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); positive regulation of rRNA processing; and positive regulation of transcription by RNA polymerase I. Predicted to localize to several cellular components, including 90S preribosome; nucleolus; and small-subunit processome. Human ortholog(s) of this gene implicated in pancreatic ductal carcinoma. Orthologous to human HEATR1 (HEAT repeat containing 1); PARTICIPATES IN ribosome biogenesis pathway; INTERACTS WITH (+)-schisandrin B; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: HEAT repeat containing 1-like 1; HEAT repeat-containing protein 1; Heatr1l1; LOC361262; RGD1564769; similar to BAP28 protein
Orthologs:
Homo sapiens (human) : HEATR1 (HEAT repeat containing 1)  HGNC  Alliance
Mus musculus (house mouse) : Heatr1 (HEAT repeat containing 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Heatr1 (HEAT repeat containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : HEATR1 (HEAT repeat containing 1)
Canis lupus familiaris (dog) : HEATR1 (HEAT repeat containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Heatr1 (HEAT repeat containing 1)
Sus scrofa (pig) : HEATR1 (HEAT repeat containing 1)
Chlorocebus sabaeus (African green monkey) : HEATR1 (HEAT repeat containing 1)
Heterocephalus glaber (naked mole-rat) : Heatr1 (HEAT repeat containing 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01766,446,135 - 66,488,303 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1766,446,162 - 66,619,250 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01768,191,902 - 68,234,059 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41768,613,162 - 68,654,896 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1762,440,337 - 62,481,984 (+)NCBICelera
Cytogenetic Map17q12.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Heatr1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1564769
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.