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Gene: Usp46 (ubiquitin specific peptidase 46) Rattus norvegicus
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Symbol: Usp46
Name: ubiquitin specific peptidase 46
Description: Predicted to have cysteine-type endopeptidase activity and thiol-dependent ubiquitin-specific protease activity. Involved in regulation of postsynaptic neurotransmitter receptor internalization. Localizes to the glutamatergic synapse. Orthologous to human USP46 (ubiquitin specific peptidase 46); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; acrylamide; all-trans-retinoic acid.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: deubiquitinating enzyme 46; LOC289584; RGD1564808; similar to ubiquitin specific protease 46; ubiquitin carboxyl-terminal hydrolase 46; ubiquitin specific protease 46; ubiquitin thioesterase 46; ubiquitin-specific-processing protease 46
Orthologs:
Homo sapiens (human) : USP46 (ubiquitin specific peptidase 46)  HGNC  Alliance
Mus musculus (house mouse) : Usp46 (ubiquitin specific peptidase 46)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Usp46 (ubiquitin specific peptidase 46)
Pan paniscus (bonobo/pygmy chimpanzee) : USP46 (ubiquitin specific peptidase 46)
Canis lupus familiaris (dog) : USP46 (ubiquitin specific peptidase 46)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Usp46 (ubiquitin specific peptidase 46)
Sus scrofa (pig) : USP46 (ubiquitin specific peptidase 46)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01436,687,134 - 36,755,360 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01436,514,023 - 36,582,331 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41436,537,951 - 36,609,397 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1433,411,301 - 33,480,344 (+)NCBICelera
Cytogenetic Map14p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Usp46
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1564808
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.