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Gene: RGD1564887 (similar to 9130011E15Rik protein) Rattus norvegicus
Symbol: RGD1564887
Name: similar to 9130011E15Rik protein
Description: INTERACTS WITH bisphenol A; decabromodiphenyl ether
Type: protein-coding
RefSeq Status: MODEL
Also known as: hypothetical protein LOC499363; LOC499363; uncharacterized protein LOC499363; UPF0668 protein C10orf76 homolog
No known orthologs. homologs ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Note: RGD1564887 (GeneID: 499363) appears to be a duplicate placement of C1H10orf76 (GeneID: 103689959) on Rnor_6.0 that is not present on Rn_Celera (Annotation Release 105) and not supported by synteny in mouse and human. Additionally, gene neighbor LOC100911951 appears to be a duplicate placement of Kcnip2 (Gene ID: 56817). BLASTing RGD1564887 XM_008760484.1 and C1H10orf76 XM_001058595.3 against the rat genome shows best hits to NC_005100.4 on Rnor_6.0 at locations where RGD1564887 and C1H10orf76 are annotated and to AC_000069.1 on Rn_Celera only at location where C1H10orf76 is annotated (Annotation Release 105). 2-sequence BLAST of RGD1564887 XM_008760484.1 against C1H10orf76 XM_001058595.3 shows high sequence identity (81% coverage, 100% identity). BLASTing RGD1564887 underlying component AABR07006889.1 against the rat genome shows best hits to NC_005100.4 on Rnor_6.0 at the location where RGD1564887 is annotated (hitting itself) and the location where C1H10orf76 is annotated. 2-sequence BLAST of RGD1564887 underlying component AABR07006889.1 against C1H10orf76 underlying component AC093941.13 shows 99% sequence identity across ~44 kb. [26 Mar 2015]
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01262,861,241 - 262,891,231 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01273,005,013 - 273,187,213 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01270,306,385 - 270,336,407 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41251,033,778 - 251,221,696 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1240,473,652 - 240,655,286 (-)NCBICelera
Cytogenetic Map1q54NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Gene-Chemical Interaction Annotations
References - curated


Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
More on RGD1564887
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1564887
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.