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Gene: Ylpm1 (YLP motif containing 1) Rattus norvegicus
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Symbol: Ylpm1
Name: YLP motif containing 1
Description: Predicted to have DNA-binding transcription repressor activity, RNA polymerase II-specific. Predicted to be involved in negative regulation of transcription by RNA polymerase II and regulation of telomere maintenance. Predicted to localize to cytosol and nuclear speck. Orthologous to human YLPM1 (YLP motif containing 1); INTERACTS WITH amphetamine; bisphenol A; endosulfan.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC299199; Nuclear protein ZAP3; RGD1564946; similar to YLP motif containing protein 1 (Nuclear protein ZAP3) (ZAP113); YLP motif-containing protein 1; Zap; Zap3
Orthologs:
Homo sapiens (human) : YLPM1 (YLP motif containing 1)  HGNC  Alliance
Mus musculus (house mouse) : Ylpm1 (YLP motif containing 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ylpm1 (YLP motif containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : YLPM1 (YLP motif containing 1)
Canis lupus familiaris (dog) : YLPM1 (YLP motif containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ylpm1 (YLP motif containing 1)
Sus scrofa (pig) : YLPM1 (YLP motif containing 1)
Chlorocebus sabaeus (African green monkey) : YLPM1 (YLP motif containing 1)
Heterocephalus glaber (naked mole-rat) : Ylpm1 (YLP motif containing 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.06108,820,774 - 108,897,209 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6108,820,774 - 108,897,426 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06116,659,698 - 116,736,133 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46109,041,410 - 109,117,751 (+)NCBIRGSC3.4rn4RGSC3.4
Celera6102,465,583 - 102,541,251 (+)NCBICelera
Cytogenetic Map6q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ylpm1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1564946
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.