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Gene: Porcn (porcupine O-acyltransferase) Rattus norvegicus
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Symbol: Porcn
Name: porcupine O-acyltransferase
Description: Predicted to have Wnt-protein binding activity and palmitoleoyltransferase activity. Predicted to be involved in several processes, including canonical Wnt signaling pathway; protein palmitoleylation; and regulation of postsynaptic membrane neurotransmitter receptor levels. Predicted to localize to several cellular components, including the AMPA glutamate receptor complex; glutamatergic synapse; and integral component of endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in focal dermal hypoplasia. Orthologous to human PORCN (porcupine O-acyltransferase); PARTICIPATES IN Wnt signaling, canonical pathway; Wnt signaling pathway; INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC317368; porcupine homolog; porcupine homolog (Drosophila); protein-cysteine N-palmitoyltransferase porcupine; protein-serine O-palmitoleoyltransferase porcupine; RGD1564947; similar to porcupine-D
Orthologs:
Homo sapiens (human) : PORCN (porcupine O-acyltransferase)  HGNC  Alliance
Mus musculus (house mouse) : Porcn (porcupine O-acyltransferase)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Porcn (porcupine O-acyltransferase)
Pan paniscus (bonobo/pygmy chimpanzee) : PORCN (porcupine O-acyltransferase)
Canis lupus familiaris (dog) : PORCN (porcupine O-acyltransferase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Porcn (porcupine O-acyltransferase)
Sus scrofa (pig) : PORCN (porcupine O-acyltransferase)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X15,035,569 - 15,048,440 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX15,035,569 - 15,048,440 (+)Ensembl
Rnor_5.0X15,819,241 - 15,831,751 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X26,317,388 - 26,330,177 (+)NCBIRGSC3.4rn4RGSC3.4
CeleraX14,371,304 - 14,383,919 (+)NCBICelera
Cytogenetic MapXq12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Porcn
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1564947
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.