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Gene: Retreg1 (reticulophagy regulator 1) Rattus norvegicus
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Symbol: Retreg1
Name: reticulophagy regulator 1
Description: Predicted to be involved in negative regulation of neuron apoptotic process; reticulophagy; and sensory perception of pain. Predicted to localize to several cellular components, including the cis-Golgi network; integral component of endoplasmic reticulum membrane; and nuclear lumen. Human ortholog(s) of this gene implicated in hereditary sensory and autonomic neuropathy type 2B. Orthologous to human RETREG1 (reticulophagy regulator 1); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 3,3',4,4',5-pentachlorobiphenyl.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Fam134b; family with sequence similarity 134, member B; hypothetical protein LOC619558; LOC619558; reticulophagy receptor 1; reticulophagy receptor FAM134B
Orthologs:
Homo sapiens (human) : RETREG1 (reticulophagy regulator 1)  HGNC  Alliance
Mus musculus (house mouse) : Retreg1 (reticulophagy regulator 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Retreg1 (reticulophagy regulator 1)
Pan paniscus (bonobo/pygmy chimpanzee) : RETREG1 (reticulophagy regulator 1)
Canis lupus familiaris (dog) : RETREG1 (reticulophagy regulator 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Retreg1 (reticulophagy regulator 1)
Sus scrofa (pig) : RETREG1 (reticulophagy regulator 1)
Chlorocebus sabaeus (African green monkey) : RETREG1 (reticulophagy regulator 1)
Heterocephalus glaber (naked mole-rat) : Retreg1 (reticulophagy regulator 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0278,391,921 - 78,401,569 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl278,391,921 - 78,399,987 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0297,821,407 - 97,972,821 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4277,470,558 - 77,566,123 (+)NCBIRGSC3.4rn4RGSC3.4
Celera272,093,456 - 72,182,485 (+)NCBICelera
Cytogenetic Map2q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Retreg1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1565003
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.