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Gene: Ifne (interferon, epsilon) Rattus norvegicus
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Symbol: Ifne
Name: interferon, epsilon
Description: Predicted to have cytokine activity and type I interferon receptor binding activity. Predicted to be involved in several processes, including B cell activation; defense response to other organism; and lymphocyte activation involved in immune response. Predicted to localize to the extracellular space. Orthologous to human IFNE (interferon epsilon); INTERACTS WITH 17beta-estradiol (ortholog); butanal (ortholog); disodium selenite (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: interferon epsilon; LOC298225; RGD1565065; similar to interferon epsilon-1
Orthologs:
Homo sapiens (human) : IFNE (interferon epsilon)  HGNC  Alliance
Mus musculus (house mouse) : Ifne (interferon epsilon)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ifne (interferon epsilon)
Pan paniscus (bonobo/pygmy chimpanzee) : IFNE (interferon epsilon)
Canis lupus familiaris (dog) : LOC102152624 (uncharacterized LOC102152624)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ifne (interferon epsilon)
Sus scrofa (pig) : IFNE (interferon epsilon)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05107,232,651 - 107,235,943 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05111,209,796 - 111,210,371 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45108,451,998 - 108,452,573 (-)NCBIRGSC3.4rn4RGSC3.4
Celera5102,299,136 - 102,302,428 (-)NCBICelera
Cytogenetic Map5q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ifne
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1565065
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.