Gene: Ttc21b (tetratricopeptide repeat domain 21B) Rattus norvegicus
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Symbol: Ttc21b
Name: tetratricopeptide repeat domain 21B
Description: Predicted to be involved in several processes, including brain development, intraciliary retrograde transport, and protein localization to cilium; predicted to colocalize with the nuclear chromatin; orthologous to human TTC21B (tetratricopeptide repeat domain 21B); INTERACTS WITH bisphenol A; endosulfan; flutamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC295654; RGD1565122; similar to tetratricopeptide repeat domain 21B; tetratricopeptide repeat protein 21B
Orthologs:
Homo sapiens (human) : TTC21B (tetratricopeptide repeat domain 21B)  HGNC  Alliance
Mus musculus (house mouse) : Ttc21b (tetratricopeptide repeat domain 21B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ttc21b (tetratricopeptide repeat domain 21B)
Pan paniscus (bonobo/pygmy chimpanzee) : TTC21B (tetratricopeptide repeat domain 21B)
Canis lupus familiaris (dog) : TTC21B (tetratricopeptide repeat domain 21B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ttc21b (tetratricopeptide repeat domain 21B)
Sus scrofa (pig) : TTC21B (tetratricopeptide repeat domain 21B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0352,286,794 - 52,361,060 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0358,917,760 - 58,990,221 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0357,297,234 - 57,298,391 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4348,147,053 - 48,222,257 (-)NCBIRGSC3.4rn4RGSC3.4
Celera350,451,676 - 50,523,656 (-)NCBICelera
Cytogenetic Map3q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ttc21b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1565122
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.