Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Rnf216 (ring finger protein 216) Rattus norvegicus
Analyze
Symbol: Rnf216
Name: ring finger protein 216
Description: Predicted to have ubiquitin protein ligase activity. Involved in protein catabolic process, modulating synaptic transmission. Localizes to the Schaffer collateral - CA1 synapse; glutamatergic synapse; and postsynaptic endocytic zone. Orthologous to human RNF216 (ring finger protein 216); INTERACTS WITH acrylamide; bisphenol A; cyclophosphamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: E3 ubiquitin-protein ligase RNF216; LOC304294; RGD1565135; similar to E3 ubiquitin ligase TRIAD3B
Orthologs:
Homo sapiens (human) : RNF216 (ring finger protein 216)  HGNC  Alliance
Mus musculus (house mouse) : Rnf216 (ring finger protein 216)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rnf216 (ring finger protein 216)
Pan paniscus (bonobo/pygmy chimpanzee) : RNF216 (ring finger protein 216)
Canis lupus familiaris (dog) : RNF216 (ring finger protein 216)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rnf216 (ring finger protein 216)
Sus scrofa (pig) : RNF216 (ring finger protein 216)
Chlorocebus sabaeus (green monkey) : RNF216 (ring finger protein 216)
Heterocephalus glaber (naked mole-rat) : Rnf216 (ring finger protein 216)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01213,508,429 - 13,631,689 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1213,508,429 - 13,632,304 (+)Ensembl
Rnor_5.01215,547,724 - 15,668,304 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41211,850,549 - 11,968,127 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1213,249,412 - 13,370,214 (+)NCBICelera
Cytogenetic Map12p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rnf216
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1565135
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.