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Gene: Clec7a (C-type lectin domain containing 7A) Rattus norvegicus
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Symbol: Clec7a
Name: C-type lectin domain containing 7A
Description: Predicted to have carbohydrate binding activity and signaling pattern recognition receptor activity. Predicted to be involved in phagocytosis, recognition. Predicted to localize to the nucleoplasm. Human ortholog(s) of this gene implicated in aspergillosis and chronic mucocutaneous candidiasis. Orthologous to human CLEC7A (C-type lectin domain containing 7A); PARTICIPATES IN phagocytosis pathway; tuberculosis pathway; INTERACTS WITH (RS)-amphetamine; 3,3',5,5'-tetrabromobisphenol A; aflatoxin B1.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: C-type lectin domain family 7 member A; C-type lectin domain family 7, member A; Clec7b; dectin-1; LOC502902; RGD1565140; similar to Clecsf12 protein
Orthologs:
Homo sapiens (human) : CLEC7A (C-type lectin domain containing 7A)  HGNC  Alliance
Mus musculus (house mouse) : Clec7a (C-type lectin domain family 7, member a)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : CLEC7A (C-type lectin domain containing 7A)
Canis lupus familiaris (dog) : CLEC7A (C-type lectin domain containing 7A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clec7a (C-type lectin domain containing 7A)
Sus scrofa (pig) : CLEC7A (C-type lectin domain containing 7A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04163,216,152 - 163,227,367 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04211,859,714 - 211,870,889 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44166,723,515 - 166,734,681 (-)NCBIRGSC3.4rn4RGSC3.4
Celera4151,587,575 - 151,598,651 (-)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Clec7a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1565140
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.