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Gene: Atoh1 (atonal bHLH transcription factor 1) Rattus norvegicus
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Symbol: Atoh1
Name: atonal bHLH transcription factor 1
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II proximal promoter sequence-specific DNA binding activity; and chromatin DNA binding activity. Predicted to be involved in several processes, including Notch signaling pathway; inner ear morphogenesis; and nervous system development. Predicted to localize to the nucleus. Orthologous to human ATOH1 (atonal bHLH transcription factor 1); INTERACTS WITH 2,2',4,4',5,5'-hexachlorobiphenyl; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: atonal homolog 1; atonal homolog 1 (Drosophila); LOC500156; RGD1565171; similar to MATH-1 protein
Orthologs:
Homo sapiens (human) : ATOH1 (atonal bHLH transcription factor 1)  HGNC  Alliance
Mus musculus (house mouse) : Atoh1 (atonal bHLH transcription factor 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atoh1 (atonal bHLH transcription factor 1)
Pan paniscus (bonobo/pygmy chimpanzee) : ATOH1 (atonal bHLH transcription factor 1)
Canis lupus familiaris (dog) : ATOH1 (atonal bHLH transcription factor 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atoh1 (atonal bHLH transcription factor 1)
Sus scrofa (pig) : ATOH1 (atonal bHLH transcription factor 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0495,498,003 - 95,500,098 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04160,284,441 - 160,286,536 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4494,109,650 - 94,111,745 (+)NCBIRGSC3.4rn4RGSC3.4
Celera488,659,055 - 88,661,150 (+)NCBICelera
Cytogenetic Map4q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Atoh1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1565171
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.