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Gene: Zcchc17 (zinc finger CCHC-type containing 17) Rattus norvegicus
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Symbol: Zcchc17
Name: zinc finger CCHC-type containing 17
Description: Predicted to have nucleic acid binding activity and zinc ion binding activity. Predicted to localize to cytosolic large ribosomal subunit and nucleolus. Orthologous to human ZCCHC17 (zinc finger CCHC-type containing 17); INTERACTS WITH bisphenol A; glafenine; vinclozolin.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC500555; nucleolar protein of 40 kDa; RGD1565267; similar to PS1D protein; zinc finger, CCHC domain containing 17
Orthologs:
Homo sapiens (human) : ZCCHC17 (zinc finger CCHC-type containing 17)  HGNC  Alliance
Mus musculus (house mouse) : Zcchc17 (zinc finger, CCHC domain containing 17)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Zcchc17 (zinc finger CCHC-type containing 17)
Pan paniscus (bonobo/pygmy chimpanzee) : ZCCHC17 (zinc finger CCHC-type containing 17)
Canis lupus familiaris (dog) : ZCCHC17 (zinc finger CCHC-type containing 17)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Zcchc17 (zinc finger CCHC-type containing 17)
Sus scrofa (pig) : ZCCHC17 (zinc finger CCHC-type containing 17)
Chlorocebus sabaeus (African green monkey) : ZCCHC17 (zinc finger CCHC-type containing 17)
Heterocephalus glaber (naked mole-rat) : Zcchc17 (zinc finger CCHC-type containing 17)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05148,535,519 - 148,577,315 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5148,535,519 - 148,577,292 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05152,252,914 - 152,294,538 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45149,347,190 - 149,388,386 (-)NCBIRGSC3.4rn4RGSC3.4
Celera5141,125,063 - 141,166,773 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Zcchc17
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1565267
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-07-28
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.