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Gene: Chmp6 (charged multivesicular body protein 6) Rattus norvegicus
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Symbol: Chmp6
Name: charged multivesicular body protein 6
CRRD ID: 1565325
Description: Predicted to have protein N-terminus binding activity. Predicted to be involved in several processes, including midbody abscission; regulation of protein metabolic process; and viral budding via host ESCRT complex. Predicted to localize to ESCRT III complex and multivesicular body. Orthologous to human CHMP6 (charged multivesicular body protein 6); PARTICIPATES IN endocytosis pathway; INTERACTS WITH 2,3,7,8-Tetrachlorodibenzofuran; 2,4-dinitrotoluene; 4-amino-2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: chromatin modifying protein 6; LOC287873; RGD1565325; similar to hypothetical protein FLJ11749
Orthologs:
Homo sapiens (human) : CHMP6 (charged multivesicular body protein 6)  HGNC  Alliance
Mus musculus (house mouse) : Chmp6 (charged multivesicular body protein 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Chmp6 (charged multivesicular body protein 6)
Pan paniscus (bonobo/pygmy chimpanzee) : CHMP6 (charged multivesicular body protein 6)
Canis lupus familiaris (dog) : CHMP6 (charged multivesicular body protein 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Chmp6 (charged multivesicular body protein 6)
Sus scrofa (pig) : CHMP6 (charged multivesicular body protein 6)
Chlorocebus sabaeus (African green monkey) : CHMP6 (charged multivesicular body protein 6)
Heterocephalus glaber (naked mole-rat) : Chmp6 (charged multivesicular body protein 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.010109,073,678 - 109,079,348 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10109,073,678 - 109,079,348 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.010108,673,903 - 108,679,573 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410109,317,687 - 109,323,357 (+)NCBIRGSC3.4rn4RGSC3.4
Celera10103,737,639 - 103,743,309 (+)NCBICelera
Cytogenetic Map10q32.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Chmp6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1565325
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.