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Gene: Tgm6 (transglutaminase 6) Rattus norvegicus
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Symbol: Tgm6
Name: transglutaminase 6
Description: Predicted to have protein-glutamine gamma-glutamyltransferase activity. Predicted to be involved in peptide cross-linking. Predicted to localize to the cytoplasm. Human ortholog(s) of this gene implicated in spinocerebellar ataxia type 35. Orthologous to human TGM6 (transglutaminase 6); INTERACTS WITH bisphenol A; thioacetamide; 2,2',4,4',5,5'-hexachlorobiphenyl (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC296152; protein-glutamine gamma-glutamyltransferase 6; RGD1565348; similar to transglutaminase 6
Orthologs:
Homo sapiens (human) : TGM6 (transglutaminase 6)  HGNC  Alliance
Mus musculus (house mouse) : Tgm6 (transglutaminase 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tgm6 (transglutaminase 6)
Pan paniscus (bonobo/pygmy chimpanzee) : TGM6 (transglutaminase 6)
Canis lupus familiaris (dog) : TGM6 (transglutaminase 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tgm6 (transglutaminase 6)
Sus scrofa (pig) : TGM6 (transglutaminase 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03122,644,183 - 122,680,054 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03129,149,397 - 129,180,898 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43117,722,990 - 117,753,457 (+)NCBIRGSC3.4rn4RGSC3.4
Celera3116,135,625 - 116,171,345 (+)NCBICelera
Cytogenetic Map3q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tgm6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1565348
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.