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Gene: Cngb3 (cyclic nucleotide gated channel subunit beta 3) Rattus norvegicus
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Symbol: Cngb3
Name: cyclic nucleotide gated channel subunit beta 3
Description: Predicted to have cGMP binding activity; intracellular cAMP-activated cation channel activity; and intracellular cGMP-activated cation channel activity. Predicted to be involved in cation transport. Predicted to localize to photoreceptor outer segment and transmembrane transporter complex. Human ortholog(s) of this gene implicated in achromatopsia 3 and color blindness. Orthologous to human CNGB3 (cyclic nucleotide gated channel subunit beta 3); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; visual phototransduction pathway; INTERACTS WITH lead diacetate; 2,3,7,8-tetrachlorodibenzodioxine (ortholog); aflatoxin B1 (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Cng6; cyclic nucleotide gated channel beta 3; cyclic nucleotide-gated cation channel beta-3; LOC500418; RGD1565364; similar to cyclic nucleotide-gated channel subunit CNG6
Orthologs:
Homo sapiens (human) : CNGB3 (cyclic nucleotide gated channel subunit beta 3)  HGNC  Alliance
Mus musculus (house mouse) : Cngb3 (cyclic nucleotide gated channel beta 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cngb3 (cyclic nucleotide gated channel subunit beta 3)
Pan paniscus (bonobo/pygmy chimpanzee) : CNGB3 (cyclic nucleotide gated channel subunit beta 3)
Canis lupus familiaris (dog) : CNGB3 (cyclic nucleotide gated channel subunit beta 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cngb3 (cyclic nucleotide gated channel subunit beta 3)
Sus scrofa (pig) : CNGB3 (cyclic nucleotide gated channel subunit beta 3)
Chlorocebus sabaeus (African green monkey) : CNGB3 (cyclic nucleotide gated channel subunit beta 3)
Heterocephalus glaber (naked mole-rat) : Cngb3 (cyclic nucleotide gated channel subunit beta 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0533,097,353 - 33,507,467 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl533,097,654 - 33,507,467 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0537,757,561 - 38,027,396 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0538,090,335 - 38,161,871 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4533,867,639 - 34,136,940 (+)NCBIRGSC3.4rn4RGSC3.4
Celera531,864,644 - 32,091,469 (+)NCBICelera
Cytogenetic Map5q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Cngb3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1565364
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.