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Gene: Cwc22 (CWC22 spliceosome associated protein homolog) Rattus norvegicus
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Symbol: Cwc22
Name: CWC22 spliceosome associated protein homolog
Description: Predicted to have RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to localize to the U2-type spliceosomal complex; cytosol; and nuclear speck. Orthologous to human CWC22 (CWC22 spliceosome associated protein homolog); INTERACTS WITH atrazine; bisphenol A; 17beta-estradiol (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: CWC22 homolog, spliceosome-associated protein; CWC22 spliceosome-associated protein; CWC22 spliceosome-associated protein homolog; CWC22 spliceosome-associated protein homolog (S. cerevisiae); LOC362153; pre-mRNA-splicing factor CWC22 homolog; RGD1565385; similar to mKIAA1604 protein
Orthologs:
Homo sapiens (human) : CWC22 (CWC22 spliceosome associated protein homolog)  HGNC  Alliance
Mus musculus (house mouse) : Cwc22 (CWC22 spliceosome-associated protein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cwc22 (CWC22 spliceosome associated protein homolog)
Pan paniscus (bonobo/pygmy chimpanzee) : CWC22 (CWC22 spliceosome associated protein homolog)
Canis lupus familiaris (dog) : CWC22 (CWC22 spliceosome associated protein homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cwc22 (CWC22 spliceosome associated protein homolog)
Sus scrofa (pig) : CWC22 (CWC22 spliceosome associated protein homolog)
more info ...
Related Pseudogenes: LOC500684  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0364,731,145 - 64,780,127 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl364,731,381 - 64,766,472 (-)Ensembl
Rnor_5.0371,298,090 - 71,346,831 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4360,560,959 - 60,600,491 (-)NCBIRGSC3.4rn4RGSC3.4
Celera362,293,622 - 62,342,514 (-)NCBICelera
Cytogenetic Map3q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Cwc22
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1565385
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.