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Gene: Pcdh19 (protocadherin 19) Rattus norvegicus
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Symbol: Pcdh19
Name: protocadherin 19
Description: Predicted to have calcium ion binding activity. Predicted to be involved in cell adhesion. Predicted to localize to the integral component of plasma membrane. Human ortholog(s) of this gene implicated in early infantile epileptic encephalopathy 9. Orthologous to human PCDH19 (protocadherin 19); INTERACTS WITH 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol; 3,7-dihydropurine-6-thione.
Type: protein-coding
RefSeq Status: INFERRED
Also known as: LOC317183; protocadherin-19; RGD1565392; similar to Protocadherin 19 precursor
Orthologs:
Homo sapiens (human) : PCDH19 (protocadherin 19)  HGNC  Alliance
Mus musculus (house mouse) : Pcdh19 (protocadherin 19)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pcdh19 (protocadherin 19)
Pan paniscus (bonobo/pygmy chimpanzee) : PCDH19 (protocadherin 19)
Canis lupus familiaris (dog) : PCDH19 (protocadherin 19)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pcdh19 (protocadherin 19)
Sus scrofa (pig) : PCDH19 (protocadherin 19)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X104,387,346 - 104,493,914 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X104,230,786 - 104,335,207 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X121,108,772 - 121,209,099 (-)NCBIRGSC3.4rn4RGSC3.4
CeleraX97,823,518 - 97,922,991 (-)NCBICelera
Cytogenetic MapXq32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pcdh19
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1565392
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.