Gene: Parn (poly(A)-specific ribonuclease) Rattus norvegicus
Analyze
Symbol: Parn
Name: poly(A)-specific ribonuclease
Description: Predicted to have cation binding activity, poly(A)-specific ribonuclease activity, and protein kinase binding activity; predicted to be involved in nucleic acid metabolic process, regulation of nucleobase-containing compound metabolic process, and regulation of telomerase RNA localization to Cajal body; predicted to localize to the cytoplasm and nucleolus; orthologous to human PARN (poly(A)-specific ribonuclease); PARTICIPATES IN RNA degradation pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; endosulfan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC360464; poly(A)-specific ribonuclease (deadenylation nuclease); poly(A)-specific ribonuclease PARN; RGD1565449; similar to Parn protein
Orthologs:
Homo sapiens (human) : PARN (poly(A)-specific ribonuclease)  HGNC  Alliance
Mus musculus (house mouse) : Parn (poly(A)-specific ribonuclease (deadenylation nuclease))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Parn (poly(A)-specific ribonuclease)
Pan paniscus (bonobo/pygmy chimpanzee) : PARN (poly(A)-specific ribonuclease)
Canis lupus familiaris (dog) : PARN (poly(A)-specific ribonuclease)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Parn (poly(A)-specific ribonuclease)
Sus scrofa (pig) : PARN (poly(A)-specific ribonuclease)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Note: This gene aligns across a gap in the Rnor_6.0 reference genome assembly, and therefore, annotation of this gene is split across NW_007905911.1 and NW_007905912.1 in NCBI's Rattus norvegicus Annotation Release 105. [18 Jun 2015]
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0101,309,724 - 1,461,123 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.010204,485 - 358,376 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4101,788,754 - 1,925,032 (+)NCBIRGSC3.4rn4RGSC3.4
Celera10473,716 - 609,470 (-)NCBICelera
Cytogenetic Map10q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Parn
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1565449
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.