Gene: Tcaf1 (TRPM8 channel-associated factor 1) Rattus norvegicus
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Symbol: Tcaf1
Name: TRPM8 channel-associated factor 1
Description: Predicted to have ion channel binding activity; predicted to be involved in negative regulation of cell migration, positive regulation of anion channel activity, and positive regulation of protein targeting to membrane; predicted to localize to the plasma membrane; orthologous to human TCAF1 (TRPM8 channel associated factor 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; chlorpyrifos; endosulfan.
Type: protein-coding
RefSeq Status: MODEL
Also known as: Fam115a; family with sequence similarity 115, member A; LOC362353; RGD1565474; similar to mKIAA0738 protein
Orthologs:
Homo sapiens (human) : TCAF1 (TRPM8 channel associated factor 1)  HGNC  Alliance
Mus musculus (house mouse) : Tcaf1 (TRPM8 channel-associated factor 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tcaf1 (TRPM8 channel associated factor 1)
Pan paniscus (bonobo/pygmy chimpanzee) : TCAF1 (TRPM8 channel associated factor 1)
Canis lupus familiaris (dog) : TCAF1 (TRPM8 channel associated factor 1)
Sus scrofa (pig) : LOC100519808 (TRPM8 channel-associated factor 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0472,119,349 - 72,171,733 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04136,913,601 - 136,965,971 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4470,522,590 - 70,544,374 (-)NCBIRGSC3.4rn4RGSC3.4
Celera466,546,646 - 66,596,025 (-)NCBICelera
Cytogenetic Map4q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tcaf1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1565474
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.